Insertion junction: CLIP2.039518_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.039518
Chromosome:chromosome 16
Location:7692850
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre16.g686173 (1 of 1) PTHR11071:SF276 - PEPTIDYL-PROLYL CIS-TRANS ISOMERASE intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TCTGTCAACTGCGGTTTCCGTGCTGCGCTCAGCCACGGCACACCCCCCGC
Internal bar code:ATATGTTGACTTGTAGATTTTC

Confirmation - LEAP-Seq

LEAP-Seq distance:3960
LEAP-Seq percent confirming:71.4286
LEAP-Seq n confirming:20
LEAP-Seq n nonconfirming:8
LEAP-Seq n unique pos:28

Suggested primers for confirmation by PCR

Suggested primer 1:AACGCCTTGACAGGGTTTCA
Suggested primer 2:GTGGTCCTCGAACAGCTCAA