Insertion junction: CLIP2.039520_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.039520
Chromosome:chromosome 9
Location:4163477
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre09.g399663 FXL7,FXL4 FixL-like PAS domain protein; (1 of 11) PF13426 - PAS domain (PAS_9) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TATATGCCTTCGCCATCTGTGTAAACTACACTTGCCCACTTAGTCTACAT
Internal bar code:AATAAGTGATTATGTGTCGTCC

Confirmation - LEAP-Seq

LEAP-Seq distance:2485
LEAP-Seq percent confirming:83.3333
LEAP-Seq n confirming:5
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:6

Suggested primers for confirmation by PCR

Suggested primer 1:GGTACACGTGGTGATGTGGT
Suggested primer 2:TACGAGGTCACACACAACGG