Insertion junction: CLIP2.039521_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.039521
Chromosome:chromosome 2
Location:3196522
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre02.g800211 (1 of 3) IPR000104//IPR020846 - Antifreeze protein, type I // Major facilitator superfamily domain intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCCGCCCAACTTAACAATACACATACACTCGCAGATTCTGCTGCAGCTCA
Internal bar code:GTTCTTTAGATCATAGCGTTGC

Confirmation - LEAP-Seq

LEAP-Seq distance:322
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:13
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:13

Suggested primers for confirmation by PCR

Suggested primer 1:GTCATGTGGGGAAGGGAGTG
Suggested primer 2:TAAGGACGTGCCAGGAACAC