Insertion junction: CLIP2.039521_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.039521
Chromosome:chromosome 2
Location:3196531
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre02.g800211 (1 of 3) IPR000104//IPR020846 - Antifreeze protein, type I // Major facilitator superfamily domain intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AGGCAGTGCGTGTGCTTCGAAGGGGCGGCGAAGGCGGCTGTAGCACAGGC
Internal bar code:CTACATAGAGTGTAGGTTAGAC

Confirmation - LEAP-Seq

LEAP-Seq distance:1291
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:60
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:60

Suggested primers for confirmation by PCR

Suggested primer 1:TAAGGACGTGCCAGGAACAC
Suggested primer 2:GTCATGTGGGGAAGGGAGTG