Insertion junction: CLIP2.039529_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.039529
Chromosome:chromosome 4
Location:1851920
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre04.g218000 MOC1 Monokaryotic Chloroplast1 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCTTTGGGATTCGAGTAAACTACCCCTCCCTCTCTCACTCTTCTATACCT
Internal bar code:CAGACCAGGGGGCATACGAGCA

Confirmation - LEAP-Seq

LEAP-Seq distance:379
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:8
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:8

Suggested primers for confirmation by PCR

Suggested primer 1:CTTGCACTGAGGGAGGACTG
Suggested primer 2:GGCGTTAGTTTAAGGGGGCT