Insertion junction: CLIP2.039534_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.039534
Chromosome:chromosome 9
Location:5610334
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre09.g409801 (1 of 2) PTHR11373:SF4 - DEOXYNUCLEOSIDE TRIPHOSPHATE TRIPHOSPHOHYDROLASE SAMHD1 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TCCGTTGTGGATGCAATCGTGCTCGCAAGCTCGAGATCCAGAGACCAGCC
Internal bar code:GGTTAGTCAACGATGGAGGGCG

Confirmation - LEAP-Seq

LEAP-Seq distance:1560
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:49
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:49

Suggested primers for confirmation by PCR

Suggested primer 1:CAGGCATTCACACAACCTGC
Suggested primer 2:AGGCGGTCATTGTTGCTGTA