Insertion junction: CLIP2.039538_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.039538
Chromosome:chromosome 4
Location:2913859
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre04.g224550 GT90F37,GT90-37 (1 of 52) PF05686 - Glycosyl transferase family 90 (Glyco_transf_90); GT90 family protein 37 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATTAGTTAAGGAAGTGGTAGACGGTAGACCATCTTGCGGGGGGGGGGGCG
Internal bar code:CGCTCTACTCTTGATTTCCTTT

Confirmation - LEAP-Seq

LEAP-Seq distance:199
LEAP-Seq percent confirming:92.8571
LEAP-Seq n confirming:13
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:14

Suggested primers for confirmation by PCR

Suggested primer 1:CAAAGCTGTCCTTGGCACAC
Suggested primer 2:AAACAGCACTAGGAGGCGTC