Insertion junction: CLIP2.039539_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.039539
Chromosome:chromosome 6
Location:2019430
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g265500 HTR11B Histone H3; (1 of 35) K11253 - histone H3 (H3) CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGAAGTCCTGGGCAATCTCACGCACCAGGCGCTGGAACGGCAGCTTGCGG
Internal bar code:CTTTTGCTGTACGGGGGAGAAG

Confirmation - LEAP-Seq

LEAP-Seq distance:4623
LEAP-Seq percent confirming:94.1176
LEAP-Seq n confirming:96
LEAP-Seq n nonconfirming:6
LEAP-Seq n unique pos:102

Suggested primers for confirmation by PCR

Suggested primer 1:CGGATAGCGGGCTTGGTAAT
Suggested primer 2:TGACTCGTTGCCAAGCTGAT