Insertion junction: CLIP2.039543_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.039543
Chromosome:chromosome 6
Location:4726903
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g279300 (1 of 1) 2.7.10.1//2.7.10.2//2.7.11.1 - Receptor protein-tyrosine kinase / Receptor protein tyrosine kinase // Non-specific protein-tyrosine kinase / Cytoplasmic protein tyrosine kinase // Non-specific serine/threonine protein kinase / Threonine-specific protein kinase CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTTACTGCCTTGCACGGGGCTCCGCGGGTACCCCTTCCTCGCGCAAGTGT
Internal bar code:AAGCGGTGCTGACTGTCAGATA

Confirmation - LEAP-Seq

LEAP-Seq distance:1725
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:5
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:5

Suggested primers for confirmation by PCR

Suggested primer 1:GCGGCGTGGTAATCGTTTAC
Suggested primer 2:GTGGTTGCGCTGATAGCATG