Insertion junction: CLIP2.039548_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.039548
Chromosome:chromosome 1
Location:2930697
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre01.g800059 (1 of 20) IPR010095//IPR013083 - Transposase IS605, OrfB, C-terminal // Zinc finger, RING/FYVE/PHD-type intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CACAGCGTACCTGGCTGGTGTAGTACTCGTCCACGTAGACCACCAGGTGG
Internal bar code:CAGTGGATGCAGTCGATTTGAA

Confirmation - LEAP-Seq

LEAP-Seq distance:2769
LEAP-Seq percent confirming:59.1837
LEAP-Seq n confirming:29
LEAP-Seq n nonconfirming:20
LEAP-Seq n unique pos:49

Suggested primers for confirmation by PCR

Suggested primer 1:CATGCAAACAACTCACCGCA
Suggested primer 2:TTCAACATGCAAACAGGGCG