Insertion junction: CLIP2.039549_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.039549
Chromosome:chromosome 10
Location:6679305
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre10.g466450 (1 of 89) PF00076 - RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) (RRM_1) CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TCGGCAGCAGGGGCCGGCTCGGCGGGCGTTGCGTCAGCGCCGCTGGCAGT
Internal bar code:TTTAGTATCTGGGGGTAGACCA

Confirmation - LEAP-Seq

LEAP-Seq distance:1104
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:23
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:23

Suggested primers for confirmation by PCR

Suggested primer 1:TGGGGAAGGGCGATAAGGTA
Suggested primer 2:TAAGGAAACCGGCTGCTCTG