Insertion junction: CLIP2.039549_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.039549
Chromosome:chromosome 10
Location:6679313
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre10.g466450 (1 of 89) PF00076 - RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) (RRM_1) CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AGGGTGACGGCGAGGGTGAGGAGGGCTCCAAGAAGACGAGCAAGTTCATG
Internal bar code:TATTCGGTCATATTGTTCATCT

Confirmation - LEAP-Seq

LEAP-Seq distance:1136
LEAP-Seq percent confirming:80.0
LEAP-Seq n confirming:12
LEAP-Seq n nonconfirming:3
LEAP-Seq n unique pos:15

Suggested primers for confirmation by PCR

Suggested primer 1:TAAGGAAACCGGCTGCTCTG
Suggested primer 2:TGGGGAAGGGCGATAAGGTA