Insertion junction: CLIP2.039551_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.039551
Chromosome:chromosome 8
Location:964538
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre08.g362000 FAP408,FAP72 Flagellar Associated Membrane Protein 72/408; (1 of 28) PTHR31600//PTHR31600:SF2 - FAMILY NOT NAMED // TINY MACROCYSTS PROTEIN B-RELATED intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTTATACGATCCGCAAAGCACCCGACAGCTATGTAGCTCACCGATTGTTC
Internal bar code:TACGGTACGTTTCGAGGCGTGA

Confirmation - LEAP-Seq

LEAP-Seq distance:529
LEAP-Seq percent confirming:83.3333
LEAP-Seq n confirming:5
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:6

Suggested primers for confirmation by PCR

Suggested primer 1:AACTGCGCAAGTTCAAGCTG
Suggested primer 2:ATATGCCACGAGCGTACCAG