Insertion junction: CLIP2.039554_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.039554
Chromosome:chromosome 11
Location:884030
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre11.g467651 (1 of 8) PF00211//PF01547 - Adenylate and Guanylate cyclase catalytic domain (Guanylate_cyc) // Bacterial extracellular solute-binding protein (SBP_bac_1) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CACCACCGCCACCGCCATCCCCACGCACCTGCCAGTACGCGGCCCGCAGC
Internal bar code:CGGAATACGAATGCTTCGGACG

Confirmation - LEAP-Seq

LEAP-Seq distance:567
LEAP-Seq percent confirming:33.3333
LEAP-Seq n confirming:3
LEAP-Seq n nonconfirming:6
LEAP-Seq n unique pos:9

Suggested primers for confirmation by PCR

Suggested primer 1:GGAGTAGGTGGCAAGAGCTC
Suggested primer 2:TAAGACGAAGGGGGAGAGGG