Insertion junction: CLIP2.039566_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.039566
Chromosome:chromosome 11
Location:906842
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre11.g467654 (1 of 1) K13117 - ATP-dependent RNA helicase DDX35 [EC:3.6.4.13] (DHX35) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCCAGCAAGGACATGCCCGCTACACCCCGCAACCTTCGCCCACCCGCTCG
Internal bar code:AGTAGTAGTAGTTGGGTACTTT

Confirmation - LEAP-Seq

LEAP-Seq distance:175
LEAP-Seq percent confirming:14.2857
LEAP-Seq n confirming:2
LEAP-Seq n nonconfirming:12
LEAP-Seq n unique pos:14

Suggested primers for confirmation by PCR

Suggested primer 1:CACGAATGTAACCCCACCCA
Suggested primer 2:GGTGGTTGGAGAGATGGTGG