Insertion junction: CLIP2.039570_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.039570
Chromosome:chromosome 9
Location:2227621
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre09.g395100 MKP4 (1 of 3) K14165 - atypical dual specificity phosphatase [EC:3.1.3.16 3.1.3.48] (K14165); Dual-specificity protein phosphatase intron
Cre09.g801012 (1 of 781) IPR000104 - Antifreeze protein, type I intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTGAAGTGCGGCAATCACATGCGCCCATGCCCCTTGATTGCAGCACTTGC
Internal bar code:GTAAGTTCGGCGTTAGATTCGT

Confirmation - LEAP-Seq

LEAP-Seq distance:2559
LEAP-Seq percent confirming:98.5294
LEAP-Seq n confirming:67
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:68

Suggested primers for confirmation by PCR

Suggested primer 1:CTCCTAAAGACGGGAGGGGA
Suggested primer 2:GGACCAGGATTCTACTCGCG