Insertion junction: CLIP2.039592_3

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.039592
Chromosome:chromosome 17
Location:1563461
Confidence (%):63
Locus systematic id Locus common name Defline Feature
Cre17.g707150 LIC2 Hypothetical protein; (1 of 45) IPR029052 - Metallo-dependent phosphatase-like intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AATCAATATGGACCCCTTGCCTCTCCCCTGCTAGGACATTGGCCCTTCGT
Internal bar code:ATATCGGGCTAATTTTTAGATT

Confirmation - LEAP-Seq

LEAP-Seq distance:634
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:2
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:2

Suggested primers for confirmation by PCR

Suggested primer 1:GAGGGTAAGAGGGAGAGGCA
Suggested primer 2:GGGTTCAATCCTAAGGGGGC