Insertion junction: CLIP2.039596_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.039596
Chromosome:chromosome 13
Location:304342
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre13.g564100 PTK2 (1 of 57) 2.7.10.2 - Non-specific protein-tyrosine kinase / Cytoplasmic protein tyrosine kinase; Protein tyrosine kinase intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGTGGGAGCATGGGCATGGCAGCATGGGTGTGGGAGTGGGGGCGTGGAGA
Internal bar code:GATGCGGAAACTTGTAAAGTCA

Confirmation - LEAP-Seq

LEAP-Seq distance:2206
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:22
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:22

Suggested primers for confirmation by PCR

Suggested primer 1:GCGAGTACGTGGCGAATCTA
Suggested primer 2:GACAACAAATCCGCACCCAC