Insertion junction: CLIP2.039598_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.039598
Chromosome:chromosome 7
Location:5964984
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre07.g354550 FAP65 (1 of 18) 3.5.1.98 - Histone deacetylase / HDAC CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ACAAGTCCGAGCTGGCAGCGGCGCTGCACAAGCACTTCCGTCTGCCCGAG
Internal bar code:ATCTCATTGGTCACACCTCTAG

Confirmation - LEAP-Seq

LEAP-Seq distance:4212
LEAP-Seq percent confirming:75.7576
LEAP-Seq n confirming:25
LEAP-Seq n nonconfirming:8
LEAP-Seq n unique pos:33

Suggested primers for confirmation by PCR

Suggested primer 1:ATGCCTCCTGCCTCAGTTTC
Suggested primer 2:ACGGCACCAACCTTCACTAG