Insertion junction: CLIP2.039600_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.039600
Chromosome:chromosome 7
Location:2395012
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre07.g328600 (1 of 1) K11804 - WD repeat-containing protein 42A (WDR42A) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CGCGCTGATACCCCTCCTGTTCGCCGCTGTCCTCCGCCCCGACAGCGCAC
Internal bar code:GTTTCTGTGGAGAATTCCCACG

Confirmation - LEAP-Seq

LEAP-Seq distance:1033
LEAP-Seq percent confirming:83.3333
LEAP-Seq n confirming:10
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:12

Suggested primers for confirmation by PCR

Suggested primer 1:CTCAAAGAGCCGGAACAGGT
Suggested primer 2:GCAGACAGCTCAAAAACGCA