Insertion junction: CLIP2.039606_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.039606
Chromosome:chromosome 7
Location:5528872
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre07.g351550 (1 of 1) PTHR31319//PTHR31319:SF1 - FAMILY NOT NAMED // CCT MOTIF FAMILY PROTEIN CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCATGCTTGGCTCGCTGCCGCTGCCATTGCCGCTGCCGGGTGACGTGGCG
Internal bar code:TTGAAAGAAGCGCGGACTCAGG

Confirmation - LEAP-Seq

LEAP-Seq distance:1045
LEAP-Seq percent confirming:91.6667
LEAP-Seq n confirming:11
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:12

Suggested primers for confirmation by PCR

Suggested primer 1:GCCTTAAGGTAGGGCTCGAC
Suggested primer 2:GCTACCATCCGTACGCCTAC