Insertion junction: CLIP2.039609_3

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.039609
Chromosome:chromosome 6
Location:1909984
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g264250 FAO6 FAD-dependent oxidoreductase; (1 of 3) 5.5.1.19 - Lycopene beta-cyclase intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGGCCCCGGGCCAGGTCCGTGGCGCCGCAGTCCATTGCGGCTGACGGGCT
Internal bar code:CCATTATATGAGTGGTAACAGA

Confirmation - LEAP-Seq

LEAP-Seq distance:1399
LEAP-Seq percent confirming:97.0588
LEAP-Seq n confirming:33
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:34

Suggested primers for confirmation by PCR

Suggested primer 1:CGTGAAACAAGTGCAGGTGG
Suggested primer 2:TCCTCTCCCCTCCATTCCTG