Insertion junction: CLIP2.039617_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.039617
Chromosome:chromosome 1
Location:6862064
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre01.g049200 (1 of 4) PTHR10334//PTHR10334:SF224 - CYSTEINE-RICH SECRETORY PROTEIN-RELATED // SUBFAMILY NOT NAMED intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GACCCTTGACCCATGCCACACGTGTGTGCCGTTGTTTCGTCTGCGGATGA
Internal bar code:CGGTATGGTAACAATCGTAGGG

Confirmation - LEAP-Seq

LEAP-Seq distance:1827
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:6
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:6

Suggested primers for confirmation by PCR

Suggested primer 1:AACTTCACTTCGGGCCAGAG
Suggested primer 2:ATTGGAGAGAACCTGGCAGC