Insertion junction: CLIP2.039617_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.039617
Chromosome:chromosome 3
Location:5632500
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g186100 (1 of 13) IPR005123//IPR006620 - Oxoglutarate/iron-dependent dioxygenase // Prolyl 4-hydroxylase, alpha subunit 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGGGGAGATGTGTGCGCCAAACGAGGACTGAGTGGGGGAGTGTTGTTGGG
Internal bar code:TCGGCTCTGGGATGCACAAAAG

Confirmation - LEAP-Seq

LEAP-Seq distance:3297
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:23
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:23

Suggested primers for confirmation by PCR

Suggested primer 1:AAACTGGACTGGGTGGCAAA
Suggested primer 2:CATGCGTGCATCTAGCCAAC