Insertion junction: CLIP2.039618_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.039618
Chromosome:chromosome 6
Location:2466185
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g269000 (1 of 1) PF09493 - Tryptophan-rich protein (DUF2389) (DUF2389) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CAAATCAACCACCTGAACCACCTGCATTGCACAGCTTCCTACCGCCGGCG
Internal bar code:AGCTTGATTTACTATGCGTTTG

Confirmation - LEAP-Seq

LEAP-Seq distance:2914
LEAP-Seq percent confirming:96.5517
LEAP-Seq n confirming:28
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:29

Suggested primers for confirmation by PCR

Suggested primer 1:ATGGGTGTGATGCCAGACAG
Suggested primer 2:GCGCCCCGATCTTCAATTTC