Insertion junction: CLIP2.039619_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.039619
Chromosome:chromosome 6
Location:1670506
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g262300 CYN51 Cyclophilin 51; (1 of 2) K05864 - peptidyl-prolyl isomerase D [EC:5.2.1.8] (PPID, CYPD) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TCGGTCACGCACTCGCTCGCTCGCGCCCTCCCGCCAAATGAAGCGTATGC
Internal bar code:GAGGGTGTACACGGCACACGTG

Confirmation - LEAP-Seq

LEAP-Seq distance:2871
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:36
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:36

Suggested primers for confirmation by PCR

Suggested primer 1:CTTTCGACAGCGCTGATTCG
Suggested primer 2:CACTCAAAGCCCAAAGTGCC