Insertion junction: CLIP2.039631_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.039631
Chromosome:chromosome 1
Location:6202486
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre01.g044200 (1 of 17) IPR001305 - Heat shock protein DnaJ, cysteine-rich domain CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTTACAACCATAGGCGCCTGGAGGTGAGGACACCCACGTGTTGGTAGCGG
Internal bar code:GACTGAGGTTTGTCATGGTGGA

Confirmation - LEAP-Seq

LEAP-Seq distance:2950
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:27
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:27

Suggested primers for confirmation by PCR

Suggested primer 1:CTTCACCTCCACGCCATTCT
Suggested primer 2:TATGCCGGCATATGTCGCTT