Insertion junction: CLIP2.039637_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.039637
Chromosome:chromosome 12
Location:3357901
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g498350 RBM25,SRE1,SRS7 Pre-mRNA splicing factor, SR-related; (1 of 1) K13168 - splicing factor, arginine/serine-rich 16 (SFRS16) intron
Cre12.g498400 outside_mRNA

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGTGTGTTCATTATGCGGTCACGTGTTGCGACTGGCGCGACTGCCTGGTA
Internal bar code:AATCGATGCGAGCTAAGAGAAT

Confirmation - LEAP-Seq

LEAP-Seq distance:911
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:7
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:7

Suggested primers for confirmation by PCR

Suggested primer 1:ATATGTATGCCGCAGACGCA
Suggested primer 2:CCGTAGGCTGTGTGTTCTGT