Insertion junction: CLIP2.039638_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.039638
Chromosome:chromosome 2
Location:1605437
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre02.g085050 COP1,PCOP1 Plant-type constitutive photomorphogenesis protein 1; (1 of 2) K10143 - E3 ubiquitin-protein ligase RFWD2 (RFWD2, COP1) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CACACATCCACACATACATACACACGCATGCACACACACACACACACACA
Internal bar code:GTATGTTCGGCTAGTTAGAGAC

Confirmation - LEAP-Seq

LEAP-Seq distance:3753
LEAP-Seq percent confirming:87.5
LEAP-Seq n confirming:35
LEAP-Seq n nonconfirming:5
LEAP-Seq n unique pos:40

Suggested primers for confirmation by PCR

Suggested primer 1:TCTGTGTGTCACGATCGCAA
Suggested primer 2:AGAAAGTACAAGGGGGCGTG