Insertion junction: CLIP2.039638_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.039638
Chromosome:chromosome 2
Location:1605437
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre02.g085050 COP1,PCOP1 Plant-type constitutive photomorphogenesis protein 1; (1 of 2) K10143 - E3 ubiquitin-protein ligase RFWD2 (RFWD2, COP1) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CATGTGGGTGCGTTCCAAGGGTGCGTGTGGGCAGGGTTGATGTCGCCATC
Internal bar code:GGAAATAGATTAGGTGCCGTCT

Confirmation - LEAP-Seq

LEAP-Seq distance:235
LEAP-Seq percent confirming:66.6667
LEAP-Seq n confirming:2
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:3

Suggested primers for confirmation by PCR

Suggested primer 1:AGAAAGTACAAGGGGGCGTG
Suggested primer 2:TCTGTGTGTCACGATCGCAA