Insertion junction: CLIP2.039649_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.039649
Chromosome:chromosome 4
Location:1867507
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre04.g218100 FAP25 (1 of 1) PF11539 - Protein of unknown function (DUF3228) (DUF3228); Flagellar Associated Protein 25 CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ACATTCTTCCTCGACAACTTCGCATTGCGCCAGTGGGACGACCCCAACTA
Internal bar code:TTTTACTAGAATGAGTTATAGA

Confirmation - LEAP-Seq

LEAP-Seq distance:414
LEAP-Seq percent confirming:71.4286
LEAP-Seq n confirming:10
LEAP-Seq n nonconfirming:4
LEAP-Seq n unique pos:14

Suggested primers for confirmation by PCR

Suggested primer 1:ACGAAGTTGGGCACGAAGAT
Suggested primer 2:CCGCTGTTCACCTTCCATCT