Insertion junction: CLIP2.039649_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.039649
Chromosome:chromosome 4
Location:1867507
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre04.g218100 FAP25 (1 of 1) PF11539 - Protein of unknown function (DUF3228) (DUF3228); Flagellar Associated Protein 25 CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTTGCTGCGATGTGGGTTGAGACATTTGAGGAGGGTTGGCGGGTTGCCGG
Internal bar code:GGCCCTGCGGTTTGGTCGTTCT

Confirmation - LEAP-Seq

LEAP-Seq distance:2522
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:48
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:48

Suggested primers for confirmation by PCR

Suggested primer 1:CCGCTGTTCACCTTCCATCT
Suggested primer 2:ACGAAGTTGGGCACGAAGAT