Insertion junction: CLIP2.039651_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.039651
Chromosome:chromosome 9
Location:5967916
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre09.g412250 (1 of 781) IPR000104 - Antifreeze protein, type I CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCAGCGCCAGTACGAACAGGAAACCCAACCAGACCAGCGGGTAGTCGGAC
Internal bar code:AAAGGATATTTAATACTGCAGT

Confirmation - LEAP-Seq

LEAP-Seq distance:488
LEAP-Seq percent confirming:66.6667
LEAP-Seq n confirming:6
LEAP-Seq n nonconfirming:3
LEAP-Seq n unique pos:9

Suggested primers for confirmation by PCR

Suggested primer 1:ACGCATGTGTGTCCGTAAGT
Suggested primer 2:TCCATCCGCAAAGACCGAAA