Insertion junction: CLIP2.039652_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.039652
Chromosome:chromosome 4
Location:2716438
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre04.g223500 (1 of 52) 2.7.11.22 - Cyclin-dependent kinase / Cdk-activating protein kinase intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTGCAGGCAAACATCTTAGGCTCCCTTGAAGAACGAGATAGCCACCGTTA
Internal bar code:ATTGCTCGAGGCTCCAAATATC

Confirmation - LEAP-Seq

LEAP-Seq distance:3196
LEAP-Seq percent confirming:94.1176
LEAP-Seq n confirming:32
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:34

Suggested primers for confirmation by PCR

Suggested primer 1:CGCTGATGTAAGGAAACGCG
Suggested primer 2:TTTAACAGTCTCAGCGCCGT