Insertion junction: CLIP2.039665_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.039665
Chromosome:chromosome 10
Location:2088426
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre10.g432950 (1 of 58) PTHR12393//PTHR12393:SF6 - SPHINGOMYELIN PHOSPHODIESTERASE RELATED // SPHINGOMYELIN PHOSPHODIESTERASE 2 CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTCCGAGCCATCCAGCCAGTCCACGATGTGGGTTTGCCCGGCGCGGCATG
Internal bar code:AATCAAACAGCAAATTCGAGTG

Confirmation - LEAP-Seq

LEAP-Seq distance:476
LEAP-Seq percent confirming:66.6667
LEAP-Seq n confirming:2
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:3

Suggested primers for confirmation by PCR

Suggested primer 1:AGGATTCCGACATGTTGCGT
Suggested primer 2:ACGACCCGGTCAAAGACATC