Insertion junction: CLIP2.039670_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.039670
Chromosome:chromosome 6
Location:1069935
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g257300 CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATGAGTATGGCCAAGGCGAGCGGGAGGAAGAGCAGGAGGAGCGGGAGGGC
Internal bar code:TGTTCGATCCTTTCGGTCTTTG

Confirmation - LEAP-Seq

LEAP-Seq distance:1901
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:6
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:6

Suggested primers for confirmation by PCR

Suggested primer 1:CATCGTCTGGATCCACCTCC
Suggested primer 2:AACGCACCTGGAGACCAAAA