Insertion junction: CLIP2.039670_3

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.039670
Chromosome:chromosome 11
Location:3496590
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre11.g477625 CHLH2,MCH2 Magnesium chelatase subunit H; (1 of 1) PTHR23304//PTHR23304:SF109 - SPOT2-RELATED // SUBFAMILY NOT NAMED intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AACCTTTTATCCGTTGATGCTCCCACCGCCCCCAGGGTATCCCTTAGGCG
Internal bar code:CCCGTAGTACCGGTACGCGGTC

Confirmation - LEAP-Seq

LEAP-Seq distance:1111
LEAP-Seq percent confirming:30.303
LEAP-Seq n confirming:20
LEAP-Seq n nonconfirming:46
LEAP-Seq n unique pos:66

Suggested primers for confirmation by PCR

Suggested primer 1:TGGGATTGTACGGCAGTGTC
Suggested primer 2:CTCGTGCGCTTCAAAACCAA