Insertion junction: CLIP2.039675_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.039675
Chromosome:chromosome 2
Location:5398938
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre02.g113751 (1 of 6) PTHR22916//PTHR22916:SF9 - GLYCOSYLTRANSFERASE // SUBFAMILY NOT NAMED CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TATGCGGGACCCGACCACACGCCAATCGCGTTGTGCAGCGACTTATATCA
Internal bar code:GTGGCGGGATTTCATCATGTCA

Confirmation - LEAP-Seq

LEAP-Seq distance:2758
LEAP-Seq percent confirming:94.3396
LEAP-Seq n confirming:50
LEAP-Seq n nonconfirming:3
LEAP-Seq n unique pos:53

Suggested primers for confirmation by PCR

Suggested primer 1:CCGGGTCGCTTGAAGTAGTT
Suggested primer 2:TCATGTATGCGACACTGCGA