Insertion junction: CLIP2.039677_3

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.039677
Chromosome:chromosome 11
Location:611335
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre11.g467610 (1 of 3) PTHR10751//PTHR10751:SF2 - GUANYLATE BINDING PROTEIN // GUANYLATE-BINDING PROTEIN intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GCTGCAAGACCTGCATCAGAGCTGTCGGGTCCTGACGGGCTGCTCCGCTC
Internal bar code:TATTAGTTTAGTGGACGATATG

Confirmation - LEAP-Seq

LEAP-Seq distance:1215
LEAP-Seq percent confirming:90.9091
LEAP-Seq n confirming:10
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:11

Suggested primers for confirmation by PCR

Suggested primer 1:CCCACAGCACATGTTTTGGG
Suggested primer 2:GTAGGAGGGAGGTTGGGCTA