Insertion junction: CLIP2.039683_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.039683
Chromosome:chromosome 7
Location:2357613
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre07.g328300 CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGTCCTTCACCGGCGCCACACGGTGCTTGTTGGGCAGGGACCCGGTGGTC
Internal bar code:GCTGAGATGTGGACGTACCGCA

Confirmation - LEAP-Seq

LEAP-Seq distance:1137
LEAP-Seq percent confirming:62.5
LEAP-Seq n confirming:5
LEAP-Seq n nonconfirming:3
LEAP-Seq n unique pos:8

Suggested primers for confirmation by PCR

Suggested primer 1:GCGCCCCGAGATCTGATAAA
Suggested primer 2:TGTTTGTTGAGCTGCATGCC