Insertion junction: CLIP2.039684_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.039684
Chromosome:chromosome 12
Location:4459024
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g520200 CPL8,PPO5 (1 of 1) PTHR13343//PTHR13343:SF16 - CREG1 PROTEIN // SUBFAMILY NOT NAMED; Conserved in the Plant Lineage intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTACACACACACACACGGCGGAATTGCTCCGTTTGTTTTTGTTTAACACA
Internal bar code:GGCAGGTAGAAATAGGACTGAT

Confirmation - LEAP-Seq

LEAP-Seq distance:3470
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:17
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:17

Suggested primers for confirmation by PCR

Suggested primer 1:CATGCTTAAGTCATGCGGGC
Suggested primer 2:CAACAAACGTGCTGACTGGG