Insertion junction: CLIP2.039695_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.039695
Chromosome:chromosome 16
Location:7471929
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre16.g681802 (1 of 2) PF00069//PF01590//PF07714 - Protein kinase domain (Pkinase) // GAF domain (GAF) // Protein tyrosine kinase (Pkinase_Tyr) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GCAGTATCCCTGGACACCACCACAAACAAGGAACACCTCCCACCCAGCGC
Internal bar code:CTGAATACCATACCGTCAGCAG

Confirmation - LEAP-Seq

LEAP-Seq distance:1707
LEAP-Seq percent confirming:73.6842
LEAP-Seq n confirming:28
LEAP-Seq n nonconfirming:10
LEAP-Seq n unique pos:38

Suggested primers for confirmation by PCR

Suggested primer 1:CTGACACTACTGGCACGTGT
Suggested primer 2:CCCACAACCAGACCCAGATC