Insertion junction: CLIP2.039697_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.039697
Chromosome:chromosome 3
Location:397970
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g144807 MAS1 (1 of 1) 2.3.3.9 - Malate synthase / Malic-condensing enzyme; Malate synthase CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CAATAGCACAAACGCCCGGCCTGTCCTCCTGGCGGCGGCGCACTAGAGCG
Internal bar code:AATTTGAATAAGGAATTTAGCA

Confirmation - LEAP-Seq

LEAP-Seq distance:1111
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:14
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:14

Suggested primers for confirmation by PCR

Suggested primer 1:ACCACATCGTCACCAAGACC
Suggested primer 2:CGTGCTGCGTATGTGTCATG