Insertion junction: CLIP2.039703_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.039703
Chromosome:chromosome 3
Location:8236162
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g200000 (1 of 2) PTHR10183//PTHR10183:SF323 - CALPAIN // SUBFAMILY NOT NAMED intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AATATCCTAATATGGCCCATTGCTGTCCAGAAAGTGACCAGGTGGATGCT
Internal bar code:ATACGTCTTTTATTCGTGGGCT

Confirmation - LEAP-Seq

LEAP-Seq distance:3556
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:54
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:54

Suggested primers for confirmation by PCR

Suggested primer 1:AAACACGCGTACTCACCCAT
Suggested primer 2:ACGAGCTGGTTGAAGGTGAG