Insertion junction: CLIP2.039703_3

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.039703
Chromosome:chromosome 5
Location:156932
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre05.g242500 PF1,RSP4 (1 of 2) PF04712 - Radial spokehead-like protein (Radial_spoke); Radial spoke protein 4 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCTCCCTCCTCGGTCTCACAGTTTGAGGCGGAGAACATGCTGGGCGCGGC
Internal bar code:GTCAATCTAGGTTGGTGGCTAG

Confirmation - LEAP-Seq

LEAP-Seq distance:3122
LEAP-Seq percent confirming:98.9796
LEAP-Seq n confirming:97
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:98

Suggested primers for confirmation by PCR

Suggested primer 1:AGGACGTGCCGCTATTTCAA
Suggested primer 2:GACCTCCTGGAGACATCCCT