Insertion junction: CLIP2.039706_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.039706
Chromosome:chromosome 9
Location:3682636
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre09.g397216 (1 of 3) K01832 - thromboxane-A synthase (TBXAS1, CYP5A) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AGCGCAAGGGAAGCAAGACGCCCCGCCGTGTGTGTGTGTGTGTGTGTGTG
Internal bar code:GGCGTTGGATGGCCGGCCCGCA

Confirmation - LEAP-Seq

LEAP-Seq distance:1991
LEAP-Seq percent confirming:50.0
LEAP-Seq n confirming:14
LEAP-Seq n nonconfirming:14
LEAP-Seq n unique pos:28

Suggested primers for confirmation by PCR

Suggested primer 1:TCCGTGTTAGGTCAACGACG
Suggested primer 2:TCGTGGGGAGGAATAGTCGT