Insertion junction: CLIP2.039715_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.039715
Chromosome:chromosome 13
Location:2553935
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre13.g580300 CGLD4,ABC3 Conserved in the Green Lineage and Diatoms; (1 of 1) PTHR12847//PTHR12847:SF6 - ATP-BINDING CASSETTE ABC TRANSPORTER-RELATED // ABC TRANSPORTER I FAMILY MEMBER 19-RELATED intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CACCGTCCGACGCATTGAGTTTACAGCATGGTAACCTGCAAGGCGCCCCC
Internal bar code:GGGTTACTCACTCCCACATAGA

Confirmation - LEAP-Seq

LEAP-Seq distance:4194
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:80
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:80

Suggested primers for confirmation by PCR

Suggested primer 1:CACGCTACTGCAAATCGTCG
Suggested primer 2:GTACACACACACGCACACAC