Insertion junction: CLIP2.039716_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.039716
Chromosome:chromosome 17
Location:3493081
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre17.g802068 (1 of 20) IPR008972 - Cupredoxin intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCCCAGGCCTGGGCACCACACCGGCGTGCGGCCAATTACTTCCTCAAACG
Internal bar code:AGATACTAATGCCGTCAAGTGA

Confirmation - LEAP-Seq

LEAP-Seq distance:2257
LEAP-Seq percent confirming:93.75
LEAP-Seq n confirming:15
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:16

Suggested primers for confirmation by PCR

Suggested primer 1:AAGGGCCACATGCTACTGAC
Suggested primer 2:GCCAGCATCAACAGCAACAA