Insertion junction: CLIP2.039727_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.039727
Chromosome:chromosome 17
Location:4272435
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre17.g729900 CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCCAGGAACGCGGGCCACTCGGGCGCATTGGCCAGTGCCCGCTGCGTTAG
Internal bar code:GTGGGCTGGCGTTCCTGGGGAG

Confirmation - LEAP-Seq

LEAP-Seq distance:842
LEAP-Seq percent confirming:62.5
LEAP-Seq n confirming:5
LEAP-Seq n nonconfirming:3
LEAP-Seq n unique pos:8

Suggested primers for confirmation by PCR

Suggested primer 1:TAAGATGCGGTATCGGTGGC
Suggested primer 2:CTTGGTTTGGTTCCGCTTGG