Insertion junction: CLIP2.039728_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.039728
Chromosome:chromosome 1
Location:229264
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre01.g001450 Predicted protein; (1 of 29) PF00612 - IQ calmodulin-binding motif (IQ) CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ACCTGCTGCGCTAGCGCTACCGCCGCCTGCTCGGGCACCTCCAAACGCCA
Internal bar code:CCGCTGTAAGTGAAAAGCCAGC

Confirmation - LEAP-Seq

LEAP-Seq distance:1350
LEAP-Seq percent confirming:97.561
LEAP-Seq n confirming:40
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:41

Suggested primers for confirmation by PCR

Suggested primer 1:GTCTGTTCCGGCCAAACAAC
Suggested primer 2:GAAGCCGTGTTGCACATTGT